Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCATTTTGGAATTTATCTACACTTAAAATGCCACCAGCAGTTGGAGG
((.((((((((((.(((....&.))).))).))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047428789
GeneSymbolSLC16A1
Binding site212,263
Score0.923
Seed0
Au0.515
Energy-17.7
Binding len20
Me-6.352
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end3
Position5UTR
2D Structure