Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTACAGGTGTGTGCCACAGGTG
((((((((((((.(((((....&)))))..)))))))))..))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000144
GeneSymbolFXN
Binding site3878,3900
Score0.846
Seed1
Au0.588
Energy-19.8
Binding len22
Me-5.227
Phylopstem-0.4824895142857143
Phylopflank-0.244087224475
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end4
Position3UTR
2D Structure