Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGGCCAGAAAATGGAGTCT
....(((((((((((((.(((.&))).)))))))..)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000147
GeneSymbolFUCA1
Binding site1206,1226
Score0.923
Seed0
Au0.588
Energy-22.9
Binding len20
Me-9.547
Phylopstem4.6071968
Phylopflank3.3619226275000003
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure