Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCCTGTGGTGCCGGGA
.(((((((((((..(((.....&))).)))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000168
GeneSymbolGLI3
Binding site4090,4107
Score0.846
Seed1
Au0.353
Energy-16.3
Binding len17
Me-5.939
Phylopstem0.964597
Phylopflank1.2170974466249997
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure