Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCAAAGGAAGCCCAGAAGGGAGGTCATTTTTACAGTGC
(((((.(((((((((((((...&.)))))))))))))..........))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000179
GeneSymbolMSH6
Binding site554,592
Score0.846
Seed0
Au0.559
Energy-26.8
Binding len30
Me-5.839
Phylopstem2.222633730769231
Phylopflank3.6400131837500003
Longest consecutive pairings13
Position of longest consecutive pairings16
Pairings in 3prime end5
PositionCDS
2D Structure