Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCGGAGACCAGGAGTCAGA
..(((((((((.(((..(((((&)))))..)))..))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000190
GeneSymbolHMBS
Binding site14,36
Score0.923
Seed1
Au0.369
Energy-21.9
Binding len22
Me-8.537
Phylopstem-0.1143543111111111
Phylopflank0.6853607118749998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure