Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTATATTTGTGTGCCAA
...(((((((((((((((....&))))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000192
GeneSymbolTBX5
Binding site3773,3790
Score0.846
Seed0
Au0.647
Energy-16.8
Binding len17
Me-6.515
Phylopstem0.806610025
Phylopflank0.16169816321428576
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure