Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTAATTAAGTAATAACATGAAATGAAACCCAGCATAGGAGCTGGC
..(((((((((.(((((((...&.)))))).).))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000192
GeneSymbolTBX5
Binding site3446,3492
Score0.923
Seed1
Au0.662
Energy-24.8
Binding len20
Me-8.304
Phylopstem3.364703333333333
Phylopflank3.5912613250000005
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure