Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCGGGGGAGGGGCGCGGG
..(((((((((((((.(((...&))).)))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000193
GeneSymbolSHH
Binding site1739,1758
Score0.846
Seed1
Au0.206
Energy-25.7
Binding len19
Me-5.19
Phylopstem1.1545734428571426
Phylopflank0.8170123274999999
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end4
Position3UTR
2D Structure