Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGTCCCAGAATGGACCCAGG
..((((.(((.((((((((((.&))).))))))).))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000195
GeneSymbolHPS1
Binding site3133,3154
Score0.846
Seed0
Au0.412
Energy-25.7
Binding len21
Me-9.325
Phylopstem3.6901841818181818
Phylopflank3.3313839300000003
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end7
Position3UTR
2D Structure