Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACACCAGTAGCATAGAGGTAGCCGGG
..((((((((((((((((((((&))))).))))......))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000198
GeneSymbolHSD3B2
Binding site500,529
Score0.808
Seed1
Au0.5
Energy-25.3
Binding len29
Me-4.957
Phylopstem3.534488435714285
Phylopflank2.4450053775000002
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure