Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCTCCAGGGCACAGTGG
(((((((.(((....(((((((&)))))))...))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000214
GeneSymbolJAG1
Binding site3002,3024
Score0.846
Seed1
Au0.397
Energy-24.8
Binding len22
Me-12.479
Phylopstem5.543010285714286
Phylopflank5.250247513749999
Longest consecutive pairings7
Position of longest consecutive pairings15
Pairings in 3prime end7
PositionCDS
2D Structure