Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGCCGGGGGGCCCTGCAGCTTCGGCTCAGGGTCC
.(((((((.(((((((((.((&))..))))).............))))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_000214
GeneSymbolJAG1
Binding site729,763
Score0.846
Seed1
Au0.309
Energy-24.2
Binding len34
Me-4.85
Phylopstem2.2572643736363642
Phylopflank2.4549071902499993
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure