Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCGGAAGGTGCTCCTGGCTCGGGAGGGGGCTGATGGGAGCCCGCCCTTCATCAAGCTGAGTGA
((((((((((((((((((((((&)))))))))))............................))))))).................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000215
GeneSymbolJAK3
Binding site1994,2062
Score0.846
Seed1
Au0.338
Energy-27.9
Binding len68
Me-3.938
Phylopstem0.03782660895522397
Phylopflank0.6996996099999999
Longest consecutive pairings11
Position of longest consecutive pairings57
Pairings in 3prime end8
PositionCDS
2D Structure