Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCTTTTAGGGGAGCCCGTGT
(((.(((((((((..(((((((&)))))))...))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000215
GeneSymbolJAK3
Binding site4643,4667
Score0.846
Seed0
Au0.412
Energy-27.2
Binding len24
Me-8.562
Phylopstem2.1980147777777774
Phylopflank2.0209909550000003
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end7
Position3UTR
2D Structure