Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAGGAGGGGCTG
....(((((((((((((((...&)))))))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000221
GeneSymbolKHK
Binding site1710,1727
Score0.821
Seed0
Au0.353
Energy-24.7
Binding len17
Me-9.547
Phylopstem0.03783663749999999
Phylopflank-0.36561975125000007
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure