Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACTTTGTGCCGGGC
.(((((((((....((((....&))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000246
GeneSymbolCIITA
Binding site1960,1976
Score0.923
Seed1
Au0.382
Energy-18.4
Binding len16
Me-12.111
Phylopstem2.028739555555555
Phylopflank0.8580974124999998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure