Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGGGAAGGCTTCCTGGGCTAGAGCCCCTTCAGGGTCTG
((((((((.(((((((((.((&)))))))))))...................)))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_000246
GeneSymbolCIITA
Binding site14623,14662
Score0.923
Seed1
Au0.397
Energy-30.2
Binding len39
Me-4.994
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings28
Pairings in 3prime end7
Position3UTR
2D Structure