Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGGCAGCTTGAGGGTTG
.((((((..(((..(((((((&)))))))..)))..)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_000246
GeneSymbolCIITA
Binding site4719,4740
Score0.923
Seed1
Au0.441
Energy-25.9
Binding len21
Me-9.309
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure