Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTATCTGGAAAGAGAGCAAGGTGA
((((.((((((((((((((((.&)))))))))))).))))..)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000251
GeneSymbolMSH2
Binding site2654,2678
Score0.846
Seed0
Au0.574
Energy-26.5
Binding len24
Me-8.057
Phylopstem3.647830764705883
Phylopflank2.7066267625
Longest consecutive pairings12
Position of longest consecutive pairings12
Pairings in 3prime end7
PositionCDS
2D Structure