Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCATTGGATTAAATTGTGCTTTGGGTG
(((((((((((((((((((...&)))))))))........))))))..)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000254
GeneSymbolMTR
Binding site1172,1202
Score0.846
Seed1
Au0.618
Energy-19.0
Binding len30
Me-3.938
Phylopstem5.3470704965517255
Phylopflank4.687529908750001
Longest consecutive pairings9
Position of longest consecutive pairings21
Pairings in 3prime end5
PositionCDS
2D Structure