Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCCAGAGCTCCAGATGGGGGTCTGAATTAACCTCTCTTGGTGG
((((((((((((((((((((((&)))))))))))........)))))))................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000259
GeneSymbolMYO5A
Binding site8527,8574
Score0.923
Seed1
Au0.544
Energy-26.3
Binding len47
Me-3.938
Phylopstem2.559700593478261
Phylopflank4.026023251250001
Longest consecutive pairings11
Position of longest consecutive pairings36
Pairings in 3prime end8
Position3UTR
2D Structure