Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACAGTATTTGTCATGCCAGT
..(((((((((((((((((...&))))))....)))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000264
GeneSymbolPTCH1
Binding site7579,7602
Score0.923
Seed1
Au0.706
Energy-19.3
Binding len23
Me-4.957
Phylopstem5.101178727272728
Phylopflank3.8438522337500003
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure