Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATGTACAATGCCTGCCGGGA
.(((((((..((.((((.(((.&))).)))).))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000271
GeneSymbolNPC1
Binding site627,648
Score0.885
Seed1
Au0.485
Energy-19.0
Binding len21
Me-7.381
Phylopstem-0.528899
Phylopflank0.44448342875000013
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure