Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCTAGAAAGGAAGAGATTTAATTGCCAGTT
.(((((((((((((((((....&)))))))))))............)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000271
GeneSymbolNPC1
Binding site4576,4606
Score1.0
Seed1
Au0.588
Energy-24.6
Binding len30
Me-3.793
Phylopstem0.5604591338620689
Phylopflank0.2844507065374998
Longest consecutive pairings11
Position of longest consecutive pairings19
Pairings in 3prime end4
Position3UTR
2D Structure