Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCAGTTAACATCCTCCTTGGCCATGGCACCAGGGTCGGAGCCACGTA
.(((((((((.((((((((...&.)).))))))..))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000271
GeneSymbolNPC1
Binding site3223,3273
Score0.923
Seed1
Au0.397
Energy-23.2
Binding len23
Me-6.618
Phylopstem2.2392907299999996
Phylopflank3.5638225912499997
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end5
PositionCDS
2D Structure