Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TATCCAGAAGAGCACACGGCAGTGT
(((((((((..(((((((((..&)))))))))))))......))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000272
GeneSymbolNPHP1
Binding site1630,1655
Score0.846
Seed1
Au0.544
Energy-20.5
Binding len25
Me-8.005
Phylopstem2.620258544444445
Phylopflank2.8732299212500005
Longest consecutive pairings13
Position of longest consecutive pairings12
Pairings in 3prime end6
PositionCDS
2D Structure