Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTACGATGGTTTTGGACCATTTATGCCGGGA
.(((((((((.((((.......&.))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000274
GeneSymbolOAT
Binding site658,689
Score1.0
Seed1
Au0.544
Energy-17.2
Binding len15
Me-6.851
Phylopstem5.1584185555555555
Phylopflank2.7850613975
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure