Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGGCTCGGAGGCGCTCTTGGGCCAGCGGCTGCGGCTGCAGG
((((((((((((((((..(((&.))).)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047428982
GeneSymbolHDAC7
Binding site782,826
Score0.923
Seed1
Au0.279
Energy-29.9
Binding len22
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure