Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATTGCATGTCGGGTT
(((((((((.((((........&)))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000282
GeneSymbolPCCA
Binding site247,262
Score0.923
Seed1
Au0.632
Energy-14.8
Binding len15
Me-6.149
Phylopstem4.826574444444445
Phylopflank4.6039893884000005
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure