Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTCAGGAAGGGGCCCTGGACGACTCCGGGTGG
((((((((((((((((((....&)))))))))))))).............)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000283
GeneSymbolPDE6B
Binding site1156,1188
Score0.846
Seed1
Au0.456
Energy-23.6
Binding len32
Me-3.938
Phylopstem4.173657341935486
Phylopflank5.023653583750001
Longest consecutive pairings14
Position of longest consecutive pairings18
Pairings in 3prime end4
PositionCDS
2D Structure