Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCATCTCCACTTGGCATTAGCTAAAACCTTCCATGTCAAGATTCAGCTAGTGGCCAAGAGATGCAGTGCCAGGA
.((((((((....((((..(((&.)))..)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000291
GeneSymbolPGK1
Binding site1400,1477
Score0.846
Seed1
Au0.5
Energy-17.1
Binding len19
Me-12.497
Phylopstem1.5874328749999997
Phylopflank1.2481704800000004
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure