Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAGCCATGACCAGTTCTGGCCAGGAGCTGGAGG
((.(((((.((((((((((((&))))))))))).................).))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047429004
GeneSymbolPFKM
Binding site2588,2627
Score0.897
Seed0
Au0.397
Energy-23.8
Binding len39
Me-6.552
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings28
Pairings in 3prime end8
Position3UTR
2D Structure