Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAACTACATCGTCATGCTGACATGTGCTGTGTGCCTGGTG
(((.((((((((..(((.((..&.)).))))))))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000296
GeneSymbolPKD1
Binding site9427,9467
Score0.923
Seed0
Au0.456
Energy-18.8
Binding len20
Me-9.116
Phylopstem2.0114851249999997
Phylopflank1.79212082
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure