Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTTTCCAGGAAGGGAGGTCTGGTGT
(((((((((((((((((((((.&))))...)))))))))..)))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000299
GeneSymbolPKP1
Binding site3066,3094
Score0.923
Seed1
Au0.485
Energy-23.4
Binding len28
Me-3.938
Phylopstem-0.8283874077777776
Phylopflank-0.5506780505
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure