Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACTCAGGGCTGGGGCCAA
...(((((((.((((((((...&))))))))..))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000316
GeneSymbolPTH1R
Binding site2087,2105
Score0.833
Seed0
Au0.559
Energy-22.1
Binding len18
Me-9.339
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end5
Position3UTR
2D Structure