Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCCTCACTTGAGGAGGAGCTGGC
..((((((((.(((((((((((&)))))))........)))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000334
GeneSymbolSCN4A
Binding site5912,5940
Score0.846
Seed1
Au0.397
Energy-24.2
Binding len28
Me-7.782
Phylopstem4.507146347368421
Phylopflank5.781465770000002
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure