Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGAGCCCAGGATGCGAGGATGGCCAGA
..((((((((((((((((((((&)))..))))))))....))))..))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000334
GeneSymbolSCN4A
Binding site57,86
Score0.846
Seed1
Au0.368
Energy-24.1
Binding len29
Me-4.957
Phylopstem0.26956860357142853
Phylopflank0.5847594537499998
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end8
Position5UTR
2D Structure