Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCCCGAGGATGAGAAGAAGGAGCCGC
...((((((((((((((((((.&)))))).........))))..)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000334
GeneSymbolSCN4A
Binding site2694,2724
Score0.846
Seed0
Au0.368
Energy-23.7
Binding len30
Me-6.515
Phylopstem4.281147384482759
Phylopflank3.9544738143750005
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure