Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATTTGCATTTATGCCAA
...(((((((.((((((((((.&))))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000343
GeneSymbolSLC5A1
Binding site3584,3602
Score0.846
Seed0
Au0.632
Energy-18.3
Binding len18
Me-9.339
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure