Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCTTTACACAATTACAGGGGGCCTGGCGGCGGTGA
((((((((((((...((((((.&)))))).............)))))))).......)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000343
GeneSymbolSLC5A1
Binding site583,622
Score0.846
Seed1
Au0.426
Energy-21.8
Binding len39
Me-6.819
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end6
PositionCDS
2D Structure