Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACAACCGGGCTGGCAC
.(((((((.(((((((.((((&)))))))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047429104
GeneSymbolCNTN2
Binding site2847,2867
Score0.923
Seed1
Au0.338
Energy-23.2
Binding len20
Me-4.85
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings16
Position of longest consecutive pairings4
Pairings in 3prime end7
PositionCDS
2D Structure