Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCCCCAAGAAGGAAGTTAGG
..((((((.((((((((((((.&))))))...)))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000369
GeneSymbolTSHR
Binding site2534,2557
Score0.923
Seed1
Au0.588
Energy-19.9
Binding len23
Me-6.013
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings17
Pairings in 3prime end7
Position3UTR
2D Structure