Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTTCAGTGCCAGGG
.((((((((....((.((((..&)))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000373
GeneSymbolUMPS
Binding site5338,5354
Score0.846
Seed1
Au0.544
Energy-17.0
Binding len16
Me-12.73
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure