Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGAGATACAGGCCCACCAGGTCTTCAAGGTATGCCGGGA
.((((((((((..((.((((((&.)))))).))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000393
GeneSymbolCOL5A2
Binding site2413,2452
Score0.923
Seed1
Au0.426
Energy-23.9
Binding len23
Me-8.662
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure