Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGAGGTGACCCAGGAACAGTTGGTCCTCCAGGGCCAGTGG
(((((((.(((((((((((...&.))))))))..............)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000393
GeneSymbolCOL5A2
Binding site1669,1712
Score0.808
Seed1
Au0.382
Energy-27.4
Binding len34
Me-6.251
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure