Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTAGGGGAACCCGGGAAGGAGGGACCTCCAGG
..(((((((((((((((((...&.)))))))))))))......)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000393
GeneSymbolCOL5A2
Binding site2950,2982
Score1.0
Seed1
Au0.309
Energy-27.0
Binding len25
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure