Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCAGCCCAGCGAAGCTCATTCCCTTACCCCCGGCCAGTGC
((((((((.((((((((((.((&)).)))))).)))).................)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000437
GeneSymbolPAFAH2
Binding site1580,1620
Score0.846
Seed1
Au0.412
Energy-21.8
Binding len40
Me-4.994
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure