Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCGGAAAGGCCAATAAAGAGTTAGA
..(((((((((((((((((...&))))))))))).........)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000439
GeneSymbolPCSK1
Binding site4431,4458
Score0.923
Seed1
Au0.632
Energy-22.3
Binding len27
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings16
Pairings in 3prime end5
Position3UTR
2D Structure