Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TACGTGTATGCTAGC
..(((((((((.(((((.....&)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000451
GeneSymbolSHOX
Binding site5125,5140
Score1.0
Seed1
Au0.5
Energy-16.8
Binding len15
Me-8.304
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure